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| 08.09.2012 | 10:15 | Bohemians Praha | - | FK MAS Táborsko | 0:0 (0:0) | |
| 10:15 | FK Baník Sokolov | - | FK Čáslav | 1:0 (1:0) | ||
| 10:15 | FK Pardubice | - | Viktoria Žižkov | 0:1 (0:0) | ||
| 16:30 | FK Baník Most | - | FK Ústí nad Labem | 1:3 (1:0) | ||
| 17:00 | 1. HFK Olomouc | - | FK Varnsdorf | 3:2 (1:1) | ||
| 17:00 | FC Fastav Zlín | - | SFC Opava | 2:2 (0:1) | ||
| 09.09.2012 | 17:00 | MFK Karviná | - | FC Graffin Vlašim | 0:0 (0:0) | |
| 17:00 | Bohemians 1905 | - | 1. SC Znojmo | 1:0 (0:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Viktoria Žižkov | 6 | 5 | 1 | 0 | 10:0 | 10 | 16 |
| 2 |
|
Bohemians 1905 | 6 | 4 | 1 | 1 | 10:3 | 7 | 13 |
| 3 |
|
1. SC Znojmo | 6 | 4 | 1 | 1 | 8:4 | 4 | 13 |
| 4 |
|
1. HFK Olomouc | 6 | 3 | 1 | 2 | 12:10 | 2 | 10 |
| 5 |
|
FK MAS Táborsko | 6 | 2 | 3 | 1 | 7:4 | 3 | 9 |
| 6 |
|
FK Varnsdorf | 6 | 2 | 2 | 2 | 9:6 | 3 | 8 |
| 7 |
|
FK Baník Sokolov | 6 | 2 | 2 | 2 | 5:7 | -2 | 8 |
| 8 |
|
FK Pardubice | 6 | 2 | 1 | 3 | 11:8 | 3 | 7 |
| 9 |
|
FC Fastav Zlín | 6 | 2 | 1 | 3 | 5:10 | -5 | 7 |
| 10 |
|
Bohemians Praha | 6 | 0 | 6 | 0 | 3:3 | 0 | 6 |
| 11 |
|
FC Graffin Vlašim | 6 | 1 | 3 | 2 | 7:9 | -2 | 6 |
| 12 |
|
FK Ústí nad Labem | 6 | 2 | 0 | 4 | 7:10 | -3 | 6 |
| 13 |
|
FK Baník Most | 6 | 1 | 3 | 2 | 5:10 | -5 | 6 |
| 14 |
|
FK Čáslav | 6 | 1 | 2 | 3 | 4:4 | 0 | 5 |
| 15 |
|
MFK Karviná | 6 | 1 | 2 | 3 | 4:9 | -5 | 5 |
| 16 |
|
SFC Opava | 6 | 0 | 3 | 3 | 6:16 | -10 | 3 |
| Aufstieg | |
| Abstieg |
