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| 20.10.2012 | 10:15 | FK Baník Sokolov | - | 1. HFK Olomouc | 1:2 (1:1) | |
| 10:15 | FK Pardubice | - | Bohemians Praha | 3:0 (0:0) | ||
| 17:00 | FC Fastav Zlín | - | FK Ústí nad Labem | 5:0 (2:0) | ||
| 18:00 | SFC Opava | - | FK MAS Táborsko | 2:0 (2:0) | ||
| 21.10.2012 | 14:30 | 1. SC Znojmo | - | Viktoria Žižkov | 0:0 (0:0) | |
| 15:30 | MFK Karviná | - | FK Čáslav | 1:1 (1:1) | ||
| 15:30 | FK Varnsdorf | - | FC Graffin Vlašim | 3:2 (1:0) | ||
| 17:00 | Bohemians 1905 | - | FK Baník Most | 2:0 (2:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. SC Znojmo | 12 | 8 | 3 | 1 | 16:6 | 10 | 27 |
| 2 |
|
Bohemians 1905 | 12 | 7 | 3 | 2 | 21:9 | 12 | 24 |
| 3 |
|
Viktoria Žižkov | 12 | 7 | 2 | 3 | 16:8 | 8 | 23 |
| 4 |
|
1. HFK Olomouc | 12 | 7 | 2 | 3 | 22:16 | 6 | 23 |
| 5 |
|
FK Baník Sokolov | 12 | 5 | 4 | 3 | 17:11 | 6 | 19 |
| 6 |
|
FK Pardubice | 12 | 5 | 3 | 4 | 20:12 | 8 | 18 |
| 7 |
|
FK Varnsdorf | 12 | 5 | 2 | 5 | 19:15 | 4 | 17 |
| 8 |
|
FC Fastav Zlín | 12 | 5 | 2 | 5 | 17:16 | 1 | 17 |
| 9 |
|
FC Graffin Vlašim | 12 | 4 | 3 | 5 | 16:20 | -4 | 15 |
| 10 |
|
FK Ústí nad Labem | 12 | 4 | 2 | 6 | 13:22 | -9 | 14 |
| 11 |
|
MFK Karviná | 12 | 3 | 4 | 5 | 12:19 | -7 | 13 |
| 12 |
|
FK MAS Táborsko | 12 | 2 | 6 | 4 | 10:11 | -1 | 12 |
| 13 |
|
Bohemians Praha | 12 | 1 | 8 | 3 | 8:12 | -4 | 11 |
| 14 |
|
FK Baník Most | 12 | 2 | 4 | 6 | 11:21 | -10 | 10 |
| 15 |
|
SFC Opava | 12 | 2 | 4 | 6 | 14:25 | -11 | 10 |
| 16 |
|
FK Čáslav | 12 | 1 | 4 | 7 | 7:16 | -9 | 7 |
| Aufstieg | |
| Abstieg |
